Associated data
Data files can be found in the publication Git repositors.
URL: https://github.com/
DOI: 0000.0000.000
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Data preview
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Survey
Resource |
Resource URL |
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Healthcare Cost and Utilization Project (HCUP) |
|
Biologic Specimen and Data Repository Information Coordinating Center (BioLINCC) |
https://biolincc.nhlbi.nih.gov/home/ |
Biospecimens/Biorepositories: Rare Disease Hub (RD-HUB) |
http://biospecimens.ordr.info.nih.gov/ |
dbGaP |
http://www.ncbi.nlm.nih.gov/gap |
Federal Interagency Traumatic Brain Injury Research (FITBIR) Informatics System |
https://fitbir.nih.gov/ |
Inter-university Consortium for Political and Social Research (ICPSR) |
https://www.icpsr.umich.edu/icpsrweb/landing.jsp |
National Addiction & HIV Data Archive Program (NAHDAP) |
http://www.icpsr.umich.edu/icpsrweb/NAHDAP/ |
National Database for Autism Research |
ndar.nih.gov |
NIDA Center on Genetics Studies |
https://nidagenetics.org/ |
NIDDK Central Repository |
https://www.niddkrepository.org/home/ |
Parkinson’s Disease Biomarkers Program Data Management Resource (PDBP DMR) |
https://pdbp.ninds.nih.gov/ |
Parkinson’s Progression Markers Initiative |
http://www.ppmi-info.org/ |
National Sleep Research Resource |
http://sleepdata.org/ |
The Immunology Database and Analysis Portal (ImmPort) |
https://immport.niaid.nih.gov/immportWeb/home/home.do?loginType=full |
Biological General Repository for Interaction Datasets (BioGRID) |
http://thebiogrid.org/ |
Cell Centred Database (CCDB) |
http://ccdb.ucsd.edu/index.shtm |
Chemical Effects in Biological Systems (CEBS) |
http://tools.niehs.nih.gov/cebs3/ui/ |
ClinicalTrials.gov |
https://clinicaltrials.gov/ |
CTN Data Share |
https://datashare.nida.nih.gov/ |
dbSNP |
http://www.ncbi.nlm.nih.gov/SNP/ |
dbVar |
http://www.ncbi.nlm.nih.gov/dbvar/ |
Eukaryotic Pathogen Database Resources (EuPathDB) |
http://eupathdb.org/eupathdb/ |
Europe PMC |
http://europepmc.org/ |
FlyBase: A Drosophila Genomic and Genetic Database |
http://flybase.org/ |
GenBank |
http://www.ncbi.nlm.nih.gov/genbank |
Gene Expression Omnibus (GEO) |
http://www.ncbi.nlm.nih.gov/geo/ |
Gene Ontology |
geneontology.org/ |
Influenza Research Database (IRD) |
http://www.fludb.org/brc/home.spg?decorator=influenza |
International Human Epigenome Consortium (IHEC) Data Portal |
|
Kegg |
www.genome.jp/kegg/kegg1.html |
miRBase |
|
Mouse genome database |
|
Mouse Phenome Database (MPD) |
- |
Nanomaterial Registry |
https://www.nanomaterialregistry.org/ |
NCBI databases |
www.ncbi.nlm.nih.gov/guide/all/ |
NCBO BioPortal |
bioportal.bioontology.org/ |
NeuroMorpho.org |
http://neuromorpho.org/neuroMorpho/index.jsp |
Neuroscience Information Framework (NIF) |
|
NIDDK database |
scicrunch.org/dknet/Data/search?q= |
Nuclear Receptor Signaling Atlas (NURSA) |
https://www.nursa.org/nursa/index.jsf |
OBO Foundry |
www.obofoundry.org/ |
Open Science Framework |
|
Panther |
pantherdb.org/ |
Pathway Commons |
www.pathwaycommons.org/about/ |
PeptideAtlas |
http://www.peptideatlas.org/ |
PMC |
http://www.ncbi.nlm.nih.gov/pmc/ |
Protein Data Bank (PDB) |
http://www.rcsb.org/pdb/home/home.do |
PubChem |
pubchem.ncbi.nlm.nih.gov/ |
Quantitative Trait Loci (QTL) Archive |
http://phenome.jax.org/db/q?rtn=qtl/home |
Rat Genome Database (RGD) |
rgd.mcw.edu/wg/home |
RxNorm |
|
Sequence Read Archive (SRA) |
http://www.ncbi.nlm.nih.gov/sra/ |
The Cancer Imaging Archive (TCIA) |
|
The Zebrafish Model Organism Database (ZFIN) |
http://zfin.org/ |
Transporter Classification Database (TCDB) |
http://www.tcdb.org/ |
UCSC Genome Browser |
genome.ucsc.edu/ |
Uniprot |
www.uniprot.org/ |
VectorBase |
|
WormBase |
https://www.wormbase.org/#01-23-6 |
Xenbase |
http://www.xenbase.org/entry/ |
PubRef |
- |
GitHub |
|
eumicrobedb |
|
bgagenomicsdb |
|
WikiPathways |
|
SNPedia |
|
BEI Resource Repository |
https://www.beiresources.org/ |
Database of Interacting Proteins (DIP) |
http://dip.doe-mbi.ucla.edu/dip/Main.cgi |
GeneNetwork |
http://www.genenetwork.org/webqtl/main.py |
Human Connectome Project |
http://www.humanconnectome.org/ |
Integrating Data for Analysis, Anonymization, and Sharing (iDASH) |
https://idash.ucsd.edu/ |
LONI Database |
https://ida.loni.usc.edu/login.jsp |
Multiparameter Intelligent Monitoring in Intensive Care II (MIMIC-II) |
https://mimic.physionet.org/database.html |
Neuroimaging Informatics Tools and Resources Clearinghouse (NITRC) |
https://www.nitrc.org/ |
NIDCR FaceBase |
www.facebase.org/ |
NIMH Limited Access Clinical Trial Datasets |
http://www.nimh.nih.gov/funding/clinical-research/datasets/nimh-procedures-for-requesting-data-sets.shtml |
NITRC-IR |
www.nitrc.org/ir/app/template/Search.vm/node/projectData.a |
OpenfMRI |
http://openfmri.org/ |
TCGA |
tcga-data.nci.nih.gov/tcga/ |
The 1000 Functional Connectomes Project (FCP) / International Neuroimaging Data-Sharing Initiative (INDI) |
http://fcon_1000.projects.nitrc.org/ |
The Cardiovascular Research Grid (CVRG) |
http://cvrgrid.org/ |
TrialShare |
https://www.itntrialshare.org/ |
National Archive of Computerized Data on Aging (NACDA) |
|
Gateway to Global Aging Data (G2Aging) |
https://www.g2aging.org/ |
Autism Brain Imaging Data Exchange (ABIDE) |
fcon_1000.projects.nitrc.org/indi/abide/ |
(Encuesta Nacional de Salud y Nutricion (Health and Nutrition National Survey of Mexico) (ENSANUT) |
|
Korean Longitudinal Study of Ageing (KLoSA) |
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Mexican Health and Aging Study (MHAS) |
|
PhenoExplorer |
phenoexplorer.org/ |
Physionet |
www.physionet.org/physiobank/ |
Metabolomics workbench |
www.metabolomicsworkbench.org/ |
BIRN |
|
Emerge database |
emerge.mc.vanderbilt.edu/ |
Healthdata.gov |
http://www.healthdata.gov/ |
Intermine |
http://intermine.org/ |
LINCS |
www.lincsproject.org/data/data-releases/ |
NCI cloud database |
cbiit.nci.nih.gov/ncip/biomedical-informatics-resources/data |
NIH Human Microbiome Project |
hmpdacc.org/resources/data_browser.php |
OpenConnectome |
openconnecto.me |
SIB Bioinformatics Portal |
www.expasy.org/ |
gramene |
|
3d Brain Atlas Reconstructor |
|
Brain Slices |
|
Reactome |
Data source
Data files can be found in the publication Git repositors.
URL: https://github.com/
DOI: 0000.0000.000